CS459 - Topics in CS: Bioinformatics Programming (BD4ISU) Spring 2020

General Information

This is the website for CS459 - Topics in CS: Bioinformatics Programming (BD4ISU) offered in Spring 2020 and taught by Jeff Kinne

• Class Hours: M 9-9:50, R 3:30-4:20

• Class Room: Root Hall - A-017 (Mon), A-019 (Thu)

• Office Hours: MW noon-2pm and TR 10:30am-noon in A-140D

Click on the links on the left for information about the course.

Course Announcements

• end of announcements

• NOTE - for previous terms of BD4ISU R programming training, see the BD4ISU blackboard course (ask to be added if you are not in the course yet) and also - Spring 2019, Summer 2019

• Jan 27 - see h1 on Homework page

• Jan 27 - for handin use --course cs459

• Feb 3 - will have quizA on Thursday. Study for it!

• Feb 3 - h1 - do the same for all files in ~cs459/h1/ directory... - do the different files have similar behavior?

• Feb 6 - quizA - see QUIZ/

• Feb 6 - update to h1, run handin --course cs459 --checkout h1

• Feb 10 - share progress, keep working on h1

• Feb 13 - share progress, status on h1?

• Feb 17 - Dwayne presents on internship possibilities

• Feb 17 - Esdras catches us up on h1 solutions, and others as well

• Feb 17 - new dataset to play with - GSE3854 Drosophila, 2006 paper, 2016 paper

• Mar 8 - another dataset of interest to look at - Johns Hopkins CCSE Covid-19, see code in /u1/junk/kinne/covid-19/

• Mar 16 - see Rmd file in code/