#!/bin/bash
time gzip -cd GRCh38_latest_rna.fna.gz | python3 counts.py

exit

# output...
jkinne@cs:/u1/junk/kinne/genomes/gene_transcripts$ ./doCounts.sh 
Percentages for overall
G 23.99678998580107
A 26.638667813734
C 23.735834024902793
T 25.628705990422247
N 2.185139888449264e-06

Percentages for first
G 32.78693289156276
A 40.52663702153632
C 16.11009387624611
T 10.576336210654809

Percentages for second
G 30.377539454180834
C 25.329148138460198
T 26.250472287615892
A 18.042840119743076

Percentages for last
C 10.7277800383654
A 68.26425623437773
T 10.175550776027437
G 10.832412951229436

Percentages for secondLast
T 22.160999469621075
A 45.03211739053568
C 17.310978843773942
G 15.495904296069304


real	0m42.141s
user	0m46.914s
sys	0m0.483s
jkinne@cs:/u1/junk/kinne/genomes/gene_transcripts$